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bioportal

pipeworx.ioInfrastructure

PulseGate's liveness check found it on 24 Sep 2026; it has been in the index since 24 Sep 2026. How this is checked

Bioportal is an HTTP JSON-RPC MCP server exposing tools for searching biomedical ontologies, listing available vocabularies, retrieving ontology class records, and finding cross-ontology mappings. It is intended for developers and AI agents working with clinical and biomedical terminology.

Inferred · not functionally tested

WebAPICloud-managed
bioportal preview
Visit pipeworx.io

Overview

6 features

Purpose: Finding authoritative biomedical ontology concepts, class records, and cross-ontology mappings through a machine-readable service.

Inferred · not functionally tested

Audience: developers building biomedical, clinical, and healthcare data applications

Inferred · not functionally tested

Functions: data_extraction

Inferred · not functionally tested

Interfaces: API: indicated (inferred, not tested) · MCP: indicated (inferred, not tested) · CLI: unknown · Self-hosting: unknown

Recorded constraints: pricing: unknown · license: Proprietary · platforms: WEB · deployment: browser, api_only, cloud_managed

Constraint provenance is unknown; confirm requirements with the publisher.

Record sources: gateway.pipeworx.io. These links do not verify the individual claims.

bioportal is an API design, testing & docs project. Inferred · not functionally tested: It focuses on finding authoritative biomedical ontology concepts, class records, and cross-ontology mappings through a machine-readable service. Inferred · not functionally tested: bioportal is a B2B product aimed at developers building biomedical, clinical, and healthcare data applications. Basis unknown · not verified: It runs on the web and API.

Behind bioportal is Pipeworx. Inferred · not functionally tested: Among its 6 catalogued features are ontology search, ontology catalogue, and class lookup. Inferred · not functionally tested: Catalogued interfaces include an MCP server and a public API.

Summary written by a language model from the project’s public pages.

Tasks: Inferred · not functionally tested

  • Ontology search
  • Ontology catalogue
  • Class lookup
  • Cross-ontology mappings
  • JSON-RPC endpoint
  • MCP tools

Topics: Inferred · not functionally tested

Tags
biomedical-ontologiesclinical-codingontology-mappingsmcp-server

JSON profile · Text profile · Access guide

Built with & integrations

Hosting
Cloudflare
Connectors
MCPAPI
Runs on
BrowserAPI-onlyCloud-managed
Detected from
Cloudflare
cf-ray header

Trust & compliance

Public signals
HTTPS

Indexing history

1

What PulseGate has recorded for this listing

  1. Indexed24 Sep · 22:19 UTC
    Bioportal seen via MCP Registry (official)
    Source: MCP Registry (official) · Open

Frequently asked questions about bioportal

What does bioportal do?
Inferred · not functionally tested: Bioportal focuses on finding authoritative biomedical ontology concepts, class records, and cross-ontology mappings through a machine-readable service. It is catalogued under API design, testing & docs on PulseGate.
Who should use bioportal?
Inferred · not functionally tested: bioportal is a B2B product built for developers building biomedical, clinical, and healthcare data applications.
What platforms does bioportal run on?
Basis unknown · not verified: bioportal runs on the web and API.
Is bioportal still active?
PulseGate's liveness check found it on 24 Sep 2026.
What projects are similar to bioportal?
Similar projects tracked by PulseGate include BioMCP, biomodels, and bioregistry.BioMCPbiomodelsbioregistry
Who develops bioportal?
bioportal is developed by Pipeworx.
Does bioportal have an API or integrations?
Inferred · not functionally tested: Yes — bioportal exposes an MCP server and a public API.

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