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biomodels

pipeworx.ioInfrastructure

PulseGate's liveness check found it on 24 Sep 2026; it has been in the index since 24 Sep 2026. How this is checked

Biomodels is a Pipeworx MCP server that exposes tools for searching BioModels and fetching complete model entries. It returns model metadata, SBML notes, curation details, publications, contributors, version history, and biological annotations.

Inferred · not functionally tested

WebAPICloud-managed
biomodels preview
Visit pipeworx.io

Overview

6 features

Purpose: Finding and retrieving published, executable computational models of biological systems.

Inferred · not functionally tested

Audience: computational biologists and biomedical researchers

Inferred · not functionally tested

Functions: data_extraction

Inferred · not functionally tested

Interfaces: API: indicated (inferred, not tested) · MCP: indicated (inferred, not tested) · CLI: unknown · Self-hosting: unknown

Recorded constraints: pricing: unknown · license: Proprietary · platforms: WEB · deployment: browser, api_only, cloud_managed

Constraint provenance is unknown; confirm requirements with the publisher.

Record sources: gateway.pipeworx.io. These links do not verify the individual claims.

biomodels sits in PulseGate's API design, testing & docs category. Inferred · not functionally tested: It focuses on finding and retrieving published, executable computational models of biological systems. Inferred · not functionally tested: It is built as a B2B product for computational biologists and biomedical researchers. Basis unknown · not verified: It runs on the web and API.

It is developed by Pipeworx. Inferred · not functionally tested: Key capabilities include model search, model retrieval, and SBML metadata. Inferred · not functionally tested: Catalogued interfaces include an MCP server and a public API.

Summary written by a language model from the project’s public pages.

Tasks: Inferred · not functionally tested

  • Model search
  • Model retrieval
  • SBML metadata
  • Curation status
  • Publication links
  • Version history

Topics: Inferred · not functionally tested

Tags
biological-modelssbml-modelscomputational-biologymcp-server

JSON profile · Text profile · Access guide

Built with & integrations

Hosting
Cloudflare
Connectors
MCPAPI
Runs on
BrowserAPI-onlyCloud-managed
Detected from
Cloudflare
cf-ray header

Trust & compliance

Public signals
HTTPS

Indexing history

1

What PulseGate has recorded for this listing

  1. Indexed24 Sep · 22:19 UTC
    Biomodels seen via MCP Registry (official)
    Source: MCP Registry (official) · Open

Frequently asked questions about biomodels

What is biomodels?
Inferred · not functionally tested: Biomodels focuses on finding and retrieving published, executable computational models of biological systems. It is catalogued under API design, testing & docs on PulseGate.
Who should use biomodels?
Inferred · not functionally tested: biomodels is a B2B product built for computational biologists and biomedical researchers.
What platforms does biomodels run on?
Basis unknown · not verified: biomodels runs on the web and API.
Is biomodels still active?
PulseGate's liveness check found it on 24 Sep 2026.
What are alternatives to biomodels?
Similar projects tracked by PulseGate include BioMCP, biosamples, and bioportal.BioMCPbiosamplesbioportal
Who makes biomodels?
biomodels is developed by Pipeworx.
Does biomodels have an API or integrations?
Inferred · not functionally tested: Yes — biomodels exposes an MCP server and a public API.

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