Prot Bert
prot_bert is an open protein language model from Rostlab for analyzing and modeling amino acid sequences. Developers and researchers can run it with Transformers and PyTorch, use fill-mask inference, or access hosted inference services.
Overview
6 featuresProt Bert sits in PulseGate's Other models category. It focuses on analyzing and modeling protein sequences with a pretrained language model. Prot Bert is an open-source project aimed at bioinformatics researchers and machine learning developers. The project is open source (MIT). It runs on the web and API, and it can be self-hosted.
Rostlab builds and maintains Prot Bert, and it first shipped in 2020. Development happens publicly on GitHub with 1.3k stars. Key capabilities include protein sequence modeling, fill-mask inference, and transformers support. It exposes integrations via a public API.
Summary written by a language model from the project’s public pages.
- Protein sequence modeling
- Fill-mask inference
- Transformers support
- PyTorch support
- Inference API
- Local deployment
Built with & integrations
- AWS
- x-amz-cf-id header · x-amz-cf-pop header · via header
Trust & compliance
Indexing history
1What PulseGate has recorded for this listing
- Indexed18 Aug · 13:19 UTCRostlab/prot_bert verified via Hugging Face EnumeratorSource: Hugging Face Enumerator · Open
Frequently asked questions about Prot Bert
- What is Prot Bert?
- Prot Bert focuses on analyzing and modeling protein sequences with a pretrained language model. It is catalogued under Other models on PulseGate.
- Who should use Prot Bert?
- Prot Bert is an open-source project built for bioinformatics researchers and machine learning developers.
- Is Prot Bert free?
- Yes — Prot Bert is open source under the MIT license and free to use.
- What platforms does Prot Bert run on?
- Prot Bert runs on the web and API. It can also be self-hosted.
- Is Prot Bert still maintained?
- Unverified. Prot Bert has not been re-checked since it entered the index, so there is no finding either way — and only a positive finding would say otherwise.
- Who makes Prot Bert?
- Prot Bert is developed by Rostlab.
- When did Prot Bert launch?
- Prot Bert first shipped in 2020.
- Is Prot Bert open source?
- Yes — Prot Bert is open source under the MIT license.
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