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Plant Genomics

github.comInfrastructure

PulseGate's liveness check found it on 24 Sep 2026; it has been in the index since 24 Sep 2026. How this is checked

Plant Genomics is an open-source Model Context Protocol server exposing 50 tools across 23 plant genomics and biological data backends. It supports stdio and Streamable HTTP connections for querying and synthesizing data from sources such as Ensembl Plants, UniProt, AlphaFold DB, NCBI BLAST, and KEGG.

Inferred · not functionally tested

Open SourceWebCLIAPISelf-hosted
Plant Genomics preview
Visit github.com

Overview

6 features

Purpose: Accessing and synthesizing plant genomics data across many specialized biological databases.

Inferred · not functionally tested

Audience: plant genomics researchers and bioinformatics developers

Inferred · not functionally tested

Functions: data_extraction

Inferred · not functionally tested

Interfaces: API: indicated (inferred, not tested) · MCP: indicated (inferred, not tested) · CLI: indicated (inferred, not tested) · Self-hosting: indicated (inferred, not tested)

Recorded constraints: pricing: open_source · license: Open Source · platforms: CLI, WEB · deployment: browser, cli, api_only, self_hosted

Constraint provenance is unknown; confirm requirements with the publisher.

Record sources: github.com. These links do not verify the individual claims.

Plant Genomics is a Frameworks & runtimes project. Inferred · not functionally tested: It focuses on accessing and synthesizing plant genomics data across many specialized biological databases. Inferred · not functionally tested: Plant Genomics is an open-source project aimed at plant genomics researchers and bioinformatics developers. Basis unknown · not verified: Plant Genomics is open source under the Open Source license. Basis unknown · not verified: It ships for the web, the command line, and API, and it can be self-hosted.

It is developed by musharna. Inferred · not functionally tested: Key capabilities include MCP server, 50 genomics tools, and multi-backend queries. Inferred · not functionally tested: Catalogued interfaces include an MCP server and a public API.

Summary written by a language model from the project’s public pages.

Tasks: Inferred · not functionally tested

  • MCP server
  • 50 genomics tools
  • Multi-backend queries
  • Cross-source synthesis
  • Stdio transport
  • Streamable HTTP

Topics: Inferred · not functionally tested

Tags
plant-genomicsbioinformaticsmcp-serverbiological-databases
AI capabilities
Structured

JSON profile · Text profile · Access guide

Built with & integrations

Connectors
MCPAPI
Runs on
BrowserCLIAPI-onlySelf-hosted

Trust & compliance

License
Open Source
Public signals
HTTPSOpen SourceFree tier

Indexing history

1

What PulseGate has recorded for this listing

  1. Indexed24 Sep · 22:19 UTC
    Plant Genomics seen via MCP Registry (official)
    Source: MCP Registry (official) · Open

Frequently asked questions about Plant Genomics

What is Plant Genomics?
Inferred · not functionally tested: Plant Genomics focuses on accessing and synthesizing plant genomics data across many specialized biological databases. It is catalogued under Frameworks & runtimes on PulseGate.
Who is Plant Genomics for?
Inferred · not functionally tested: Plant Genomics is an open-source project built for plant genomics researchers and bioinformatics developers.
Is Plant Genomics free?
Basis unknown · not verified: Yes — Plant Genomics is open source under the Open Source license and free to use.
What platforms does Plant Genomics run on?
Basis unknown · not verified: Plant Genomics runs on the web, the command line, and API. It can also be self-hosted.
Is Plant Genomics still active?
PulseGate's liveness check found it on 24 Sep 2026.
What are alternatives to Plant Genomics?
Similar projects tracked by PulseGate include PlantOmicsGwas, brapi-mcp-server, and plantcv-mcp.PlantOmicsGwasbrapi-mcp-serverplantcv-mcp
Who makes Plant Genomics?
Plant Genomics is developed by musharna.
Is Plant Genomics open source?
Basis unknown · not verified: Yes — Plant Genomics is open source under the Open Source license.

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