pdberellig is an open-source CLI toolkit for the functional annotation of ligands in the Protein Data Bank (PDB). It helps researchers identify cofactors, reactants, and drugs, streamlining bioinformatics workflows. Designed for bioinformatics researchers and developers.
pdberellig is an Other dev tools product. It focuses on automating the functional annotation of ligands in PDB files for bioinformatics research. It is built as an open-source project for bioinformatics researchers and developers. pdberellig is open source under the Apache-2.0 license. The product ships for the command line, and it can be self-hosted.
PDBeurope builds and maintains pdberellig, and the product first shipped in 2024. Development happens publicly on GitHub with 15 commits in the last 90 days. PulseGate's similarity index finds few close equivalents — pdberellig occupies a relatively distinct niche. Key capabilities include ligand annotation, PDB integration, and cofactor identification.
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