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ncbi-datasets

pipeworx.ioInfrastructure

No liveness check has reached it yet; it has been in the index since 10 Oct 2026. How this is checked

ncbi-datasets is a hosted MCP server exposing tools for querying NCBI genome assemblies and gene records. Developers and researchers can retrieve assembly metadata, gene identifiers, descriptions, coordinates, synonyms, and cross-references through JSON-RPC over HTTP.

Inferred · not functionally tested

WebAPICloud-managed
ncbi-datasets preview
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Overview

6 features

Purpose: Accessing authoritative NCBI genome assembly and gene records programmatically without manually querying databases.

Inferred · not functionally tested

Audience: bioinformatics developers and researchers

Inferred · not functionally tested

Functions: data_extraction

Inferred · not functionally tested

Interfaces: API: indicated (inferred, not tested) · MCP: indicated (inferred, not tested) · CLI: unknown · Self-hosting: unknown

Recorded constraints: pricing: unknown · license: Proprietary · platforms: WEB · deployment: browser, api_only, cloud_managed

Constraint provenance is unknown; confirm requirements with the publisher.

Record sources: gateway.pipeworx.io. These links do not verify the individual claims.

ncbi-datasets is an API design, testing & docs project. Inferred · not functionally tested: It focuses on accessing authoritative NCBI genome assembly and gene records programmatically without manually querying databases. Inferred · not functionally tested: It is built as a B2B product for bioinformatics developers and researchers. Basis unknown · not verified: It runs on the web and API.

Behind ncbi-datasets is Pipeworx. Inferred · not functionally tested: Among its 6 catalogued features are genome reports, gene lookup, and assembly metadata. Inferred · not functionally tested: Catalogued interfaces include an MCP server and a public API.

Summary written by a language model from the project’s public pages.

Tasks: Inferred · not functionally tested

  • Genome reports
  • Gene lookup
  • Assembly metadata
  • Gene identifiers
  • Cross-references
  • JSON-RPC endpoint

Topics: Inferred · not functionally tested

Tags
ncbi-datasetsgenome-assembliesgene-lookupbioinformatics-api

JSON profile · Text profile · Access guide

Built with & integrations

Hosting
Cloudflare
Connectors
MCPAPI
Runs on
BrowserAPI-onlyCloud-managed
Detected from
Cloudflare
cf-ray header

Trust & compliance

Public signals
HTTPS

Indexing history

1

What PulseGate has recorded for this listing

  1. Indexed10 Oct · 00:02 UTC
    Ncbi Datasets seen via MCP Registry (official)
    Source: MCP Registry (official) · Open

Frequently asked questions about ncbi-datasets

What does ncbi-datasets do?
Inferred · not functionally tested: Ncbi-datasets focuses on accessing authoritative NCBI genome assembly and gene records programmatically without manually querying databases. It is catalogued under API design, testing & docs on PulseGate.
Who should use ncbi-datasets?
Inferred · not functionally tested: ncbi-datasets is a B2B product built for bioinformatics developers and researchers.
What platforms does ncbi-datasets run on?
Basis unknown · not verified: ncbi-datasets runs on the web and API.
Is ncbi-datasets still maintained?
Unverified. ncbi-datasets has not been re-checked since it entered the index, so there is no finding either way — and only a positive finding would say otherwise.
What projects are similar to ncbi-datasets?
Similar projects tracked by PulseGate include ncbi-eutils, cbioportal, and gdc.ncbi-eutilscbioportalgdc
Who develops ncbi-datasets?
ncbi-datasets is developed by Pipeworx.
Does ncbi-datasets have an API or integrations?
Inferred · not functionally tested: Yes — ncbi-datasets exposes an MCP server and a public API.

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