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lobster-genomics

PyPIInfrastructure

PulseGate's liveness check found it on 13 Sep 2026; it is registered on PyPI and has been in the index since 27 Jun 2026. How this is checked

lobster-genomics is an open-source AI agent for genomics data analysis, supporting workflows like GWAS, variant annotation, and integration with VCF and PLINK formats. It is designed for researchers and bioinformaticians seeking to automate genomics analysis using AI.

Inferred · not functionally tested

Open SourceAGPL-3.0-or-laterCLI
Visit PyPI
34stars
6forks
3features
2026since

Overview

3 features

Purpose: Automates genomics data analysis and variant annotation using AI agents for bioinformatics workflows.

Inferred · not functionally tested

Audience: genomics researchers and bioinformaticians

Inferred · not functionally tested

Functions: agents, data_extraction, workflow_automation

Inferred · not functionally tested

Interfaces: API: indicated (inferred, not tested) · MCP: unknown · CLI: indicated (inferred, not tested) · Self-hosting: unknown

Recorded constraints: pricing: open_source · license: AGPL-3.0-or-later · platforms: CLI · deployment: cli

Constraint provenance is unknown; confirm requirements with the publisher.

Record sources: pypi.org. These links do not verify the individual claims.

lobster-genomics sits in PulseGate's Frameworks & runtimes category. Inferred · not functionally tested: It automates genomics data analysis and variant annotation using AI agents for bioinformatics workflows. Inferred · not functionally tested: lobster-genomics is an open-source project aimed at genomics researchers and bioinformaticians. Basis unknown · not verified: The project is open source (AGPL-3.0-or-later). Basis unknown · not verified: lobster-genomics is available on the command line.

It is developed by the-omics-os, and it first shipped in 2026. Development happens publicly on GitHub with 34 stars and 53 commits in the last 90 days. Inferred · not functionally tested: Key capabilities include variant annotation, GWAS analysis, and VCF/PLINK support. Inferred · not functionally tested: Catalogued interfaces include a public API.

Summary written by a language model from the project’s public pages.

Tasks: Inferred · not functionally tested

  • Variant annotation
  • GWAS analysis
  • VCF/PLINK support

Topics: Inferred · not functionally tested

Tags
genomics-agentvariant-annotationgwas-analysis
AI capabilities
Structured
Inference: LocalWeights: Open

JSON profile · Text profile · Access guide

Built with & integrations

AI providers
anthropicopenailocal_oss
Connectors
API
Runs on
CLI

Trust & compliance

License
AGPL-3.0-or-later
Public signals
HTTPSOpen SourceFree tierActive maintenance

Indexing history

1

What PulseGate has recorded for this listing

  1. Indexed7 Oct · 00:07 UTC
    lobster-genomics seen via PyPI Fresh Feed
    Source: PyPI Fresh Feed · Open

Frequently asked questions about lobster-genomics

What is lobster-genomics?
Inferred · not functionally tested: Lobster-genomics automates genomics data analysis and variant annotation using AI agents for bioinformatics workflows. It is catalogued under Frameworks & runtimes on PulseGate.
Who should use lobster-genomics?
Inferred · not functionally tested: lobster-genomics is an open-source project built for genomics researchers and bioinformaticians.
Is lobster-genomics free?
Basis unknown · not verified: Yes — lobster-genomics is open source under the AGPL-3.0-or-later license and free to use.
What platforms does lobster-genomics run on?
Basis unknown · not verified: lobster-genomics runs on the command line.
Is lobster-genomics still active?
PulseGate's liveness check found it on 13 Sep 2026. Its GitHub repository shows 53 commits in the last 90 days.
What projects are similar to lobster-genomics?
Similar projects tracked by PulseGate include lobster-ai, lobster-proteomics, and lobster-metabolomics.lobster-ailobster-proteomicslobster-metabolomics
Who makes lobster-genomics?
lobster-genomics is developed by the-omics-os.
How long has lobster-genomics been around?
lobster-genomics first shipped in 2026.

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