omero-analysis
omero-analysis is a Python package that delivers browser-local reusable Methods, Pipelines, Notebooks, and an integrated Method-authoring Assistant for the OMERO.web platform. It enables bioimage researchers to create, share, and execute reproducible analysis workflows directly in the web interface without leaving the OMERO environment. The project is open source under AGPL-3.0-or-later and hosted on GitHub.
Open SourceAGPL-3.0-or-laterCLIWebSelf-hosted
Overview
5 featuresIn the Data science & ML workbench space, omero-analysis takes a focused approach. It focuses on running reproducible image analysis methods, pipelines and notebooks directly in the browser within an OMERO.web environment. It is built as an open-source project for bioimage analysts and developers. The project is open source (AGPL-3.0-or-later). omero-analysis is available on the command line and the web, and it can be self-hosted.
Behind omero-analysis is NL-BioImaging, and it first shipped in 2026. The project is developed in the open on GitHub with 38 commits in the last 90 days. Among its 5 catalogued features are Reusable Methods, Analysis Pipelines, and Jupyter Notebooks.
Summary written by a language model from the project’s public pages.
- Reusable Methods
- Analysis Pipelines
- Jupyter Notebooks
- Method Authoring Assistant
- Browser Execution
Tags
omero-webbioimage-analysisjupyter-notebooksanalysis-pipelinesmethod-authoring
Built with & integrations
Framework
Django
Runs on
CLIBrowserSelf-hosted
Trust & compliance
License
AGPL-3.0-or-later
Verified signals
Indexing history
1What PulseGate has recorded for this listing
Frequently asked questions about omero-analysis
- What does omero-analysis do?
- Omero-analysis focuses on running reproducible image analysis methods, pipelines and notebooks directly in the browser within an OMERO.web environment. It is catalogued under Data science & ML workbench on PulseGate.
- Who is omero-analysis for?
- omero-analysis is an open-source project built for bioimage analysts and developers.
- Does omero-analysis have a free plan?
- Yes — omero-analysis is open source under the AGPL-3.0-or-later license and free to use.
- What platforms does omero-analysis run on?
- omero-analysis runs on the command line and the web. It can also be self-hosted.
- Is omero-analysis still active?
- The GitHub repository shows 38 commits in the last 90 days.
- What are alternatives to omero-analysis?
- Similar projects tracked by PulseGate include MFGLib documentation, MOMENT 1 Small, and isolation-forest-onnx.MFGLib documentationMOMENT 1 Smallisolation-forest-onnx
- Who develops omero-analysis?
- omero-analysis is developed by NL-BioImaging.
- When did omero-analysis launch?
- omero-analysis first shipped in 2026.
Also in Data science & ML workbench
Same category — not a similarity match