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Cellpose

huggingface.co·Other AI

Cellpose is a web-based application for automatic cell segmentation in microscopy images. Users can upload images in various formats and receive clear outlines, flow visualizations, and downloadable mask files, streamlining analysis for biological research.

FreeWebSelf-hostedCloud-managed
CCellpose preview
Visit huggingface.co↗

Overview

5 features

Cellpose sits in PulseGate's Other AI category. Automatically segmenting and identifying cells in microscopy images without manual annotation. Cellpose is a B2B product aimed at biologists and researchers working with microscopy data. Cellpose is free to use. It ships for the web, and it can be self-hosted.

Behind Cellpose is mouseland, and it first shipped in 2023. Key capabilities include microscopy image upload, cell segmentation, and outline visualization.

Summary written by a language model from the project’s public pages.

  • ✓Microscopy image upload
  • ✓Cell segmentation
  • ✓Outline visualization
  • ✓Mask file download
  • ✓Batch processing
Tags
cell-segmentationmicroscopy-analysisimage-masks
AI capabilities
Image
Inference: Cloud API

Built with & integrations

Hosting
AWS
AI providers
local_oss
Runs on
BrowserSelf-hostedCloud-managed
Detected from
AWS
x-amz-cf-id header · x-amz-cf-pop header · via header
local_oss
huggingface in the HTML

Trust & compliance

Verified signals
✓HTTPS✓Free tier

Indexing history

1

What PulseGate has recorded for this listing

  1. Indexed10 Jul · 22:24 UTC
    mouseland/cellpose verified against its public source
    Source: PulseGate · Open ↗

Frequently asked questions about Cellpose

What is Cellpose?
Automatically segmenting and identifying cells in microscopy images without manual annotation. It is catalogued under Other AI on PulseGate.
Who is Cellpose for?
Cellpose is a B2B product built for biologists and researchers working with microscopy data.
Is Cellpose free?
Yes — Cellpose is free to use.
What platforms does Cellpose run on?
Cellpose runs on the web. It can also be self-hosted.
Is Cellpose still active?
Unverified. Cellpose has not been re-checked since it entered the index, so there is no finding either way — and only a positive finding would say otherwise.
What projects are similar to Cellpose?
Similar projects tracked by PulseGate include verdikt, cliver, and ChatGPT Prompts Extension.verdiktcliverChatGPT Prompts Extension
Who makes Cellpose?
Cellpose is developed by mouseland.
How long has Cellpose been around?
Cellpose first shipped in 2023.

At a glance

Platforms
Web
Languages
English
Built for
Biologists and researchers working with microscopy data
Model
B2B
Solves
Automatically segmenting and identifying cells in microscopy images without manual annotation.

Registered as

Hugging Face Spaces
mouseland/cellpose

Developer

mouseland

Live coverage

Identity confidence
High · 95
Indexed
10 Jul 2026
Lifecycle
Unverified
Last seen
10 Jul 2026
Identity audit (12)
Slug
mouseland-cellpose-huggingface-co
Verification state
Indexed for public listing
Listing state
Listed: yes
Index status
Included in index
Latest evidence snapshot
10 Jul 2026
Timeline basis
Indexed-at chronology. This listing's first-seen date was written by the catalog backfill, not observed here, so it is not treated as a sighting.
Name from
Derived from the project's own page and URL.
Category from
Assigned by a language model.
Summary from
Written by a language model from public pages.
Languages from
Detected by a language model from page content.
Last updated
22 Jul 2026
Canonical URL
https://huggingface.co/spaces/mouseland/cellpose

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