Hidden Markov Model for calling chromatin footprints from fiber-seq and DAF-seq data
fiberhmm sits in PulseGate's CLI tools & terminal category. It focuses on identifying chromatin footprints from fiber-seq and DAF-seq data using HMM analysis. It is built as an open-source project for bioinformaticians and genomics researchers. fiberhmm is open source under the MIT license. fiberhmm is available on the web and the command line.
Behind fiberhmm is fiberseq, and the product first shipped in 2024. Development happens publicly on GitHub with 161 commits in the last 90 days. PulseGate's similarity index finds few close equivalents — fiberhmm occupies a relatively distinct niche. Key capabilities include chromatin footprinting, HMM analysis, and fiber-seq support.
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