PulseGateLive intelligence on AI-era software
Coverage
175,619

Software tracked

 

Freshness
29 min ago

Last update

 

Cadence
487/day

7-day average

Indexed today: 804

PulseGate

Live intelligence on the software shipping in the AI era — apps, models, agents, and infra.

Software is shipping faster than ever, and a growing share of it lives outside the official app stores. PulseGate tracks it live — free, for builders, analysts, and everyone keeping up.

Follow
GitHubX (Twitter)LinkedIn

Platform

  • All Apps
  • Full Index
  • Categories
  • Industry Updates
  • Data Sources
  • Coverage Rules
  • Glossary
  • Embed Widget

Support

  • Help Center
  • Suggest a URL
  • Report an Issue

Company

  • About
  • Dimaxia
  • Press & Data
  • Contact
  • Platform Status

Legal

  • Privacy
  • Terms
  • Disclaimer

© 2026 PulseGate. Operated by Dimaxia, a brand of Dymaxio s.r.o., Prague, Czech Republic.·

All systems operational
PulseGate
COCoot logo
Coot
Visit ↗
  1. Home/
  2. Design & Creative/
  3. Coot
←Back to results
CCoot logo

Coot

Flathub·Design & Creative

Coot is a desktop application for scientists and researchers to build, manipulate, and analyze macromolecular models, particularly proteins and nucleic acids, using X-ray crystallography or cryo-EM data. It offers tools for model refinement, superposition, and fragment manipulation.

Free
LinuxWindowsmacOS
CCoot logo
Visit Flathub↗

Overview

8 features

Coot is a Design & Creative product. It focuses on enabling scientists to build and analyze macromolecular models from X-ray crystallography or cryo-EM data. Coot is a B2B product aimed at structural biologists. The product is available for free. It runs on Linux, Windows, and macOS.

Behind Coot is Paul Emsley. Among its 8 catalogued features are model building, molecular analysis, and minimization.

  • ✓Model building
  • ✓Molecular analysis
  • ✓Minimization
  • ✓Superposition
  • ✓Fragment manipulation
  • ✓Rotamer fitting
  • ✓De novo building
  • ✓Refinement

Tags

macromolecular-modelingx-ray-crystallographyprotein-structure

Built with & integrations

Runs on
LinuxWindowsmacOS

Trust & compliance

LicenseProprietary
Verified signals
✓ HTTPS✓ Free tier

Recent events

Latest indexed changes and source events

  1. IndexedJul 1, 5:35 PM

    coot verified by the PulseGate indexer

    Source: PulseGate indexerOpen ↗

Frequently asked questions about Coot

What is Coot?
Coot focuses on enabling scientists to build and analyze macromolecular models from X-ray crystallography or cryo-EM data. It is catalogued under Design & Creative on PulseGate.
Who should use Coot?
Coot is a B2B product built for structural biologists.
Does Coot have a free plan?
Yes — Coot is free to use.
What platforms does Coot run on?
Coot runs on Linux, Windows, and macOS.
Is Coot still active?
PulseGate's liveness checks currently classify Coot as active.
What tools are similar to Coot?
Similar tools tracked by PulseGate include Coccinelle, Kolf, and Cahootz.CoccinelleKolfCahootz
Who develops Coot?
Coot is developed by Paul Emsley.

At a glance

Platforms
Desktop
Languages
English
First seen
Aug 11, 2025
Activity
🟢 Active
Status
🟢 Active
Built for
structural biologists
Model
B2B
Solves
Enabling scientists to build and analyze macromolecular models from X-ray crystallography or cryo-EM data.

Developer

Paul Emsley

Live coverage

Confidence
Medium · 70
Indexed
Jul 1, 2026
Lifecycle
Alive
Activity
Active
First seen
Aug 2025
Last seen
3w ago
Identity audit (9)
Entity ID
cmr2cwzty00yr7vi7tvixi4cg
Slug
coot-flathub-org
Verification state
Indexed for public listing
Claim / listing state
Unclaimed · listed: yes
Index status
Included in index
Latest evidence snapshot
Jul 1, 2026
Timeline basis
Indexed-at chronology (no inferred launch/funding milestones).
Last updated
Jul 13, 2026
Canonical URL
https://flathub.org/apps/io.github.pemsley.coot

Similar apps

Other apps tracked under the same category.

  • Coccinelle
    flathub.org
  • Kolf
    flathub.org
  • Cahootz
    cahootzcoops.com
  • CooQu Cook
    google.com
  • CooQu
    cooqu.com.au
  • Cokeep
    cokeep.me