CodonAdaptPy is a Python library for codon usage analysis, host adaptation, evolutionary studies, phylogenetics, and sequence optimization. It enables researchers to calculate metrics like CAI, adapt sequences for better expression in target organisms, and perform bioinformatics tasks related to codon bias and phylogenetics. Primarily used via Python scripts or as a CLI tool by developers and scientists working in synthetic biology and computational genomics.
In the Developer Tools space, CodonAdaptPy takes a focused approach. It focuses on analyzing codon usage bias and optimizing DNA sequences for expression in heterologous hosts without manual bioinformatics scripting. It is built as an open-source project for bioinformaticians and computational biologists. CodonAdaptPy is open source under the GPL-3.0-or-later license. The product ships for the command line and API.
Behind CodonAdaptPy is Navduhan, and the product first shipped in 2026. Development happens publicly on GitHub with 10 commits in the last 90 days. Key capabilities include Codon Usage Analysis, Host Adaptation, and Sequence Optimization.
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