PulseGatePost-LLM software, agents & workflows market (since 2022)
Coverage
166,813

Apps indexed

 

Freshness
12 min ago

Last update

 

Cadence
1,440/day

7-day average

Indexed today: 567

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bioontologies
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bioontologies

pypi.org·Infrastructure

bioontologies is an open-source CLI toolkit designed for working with biomedical ontologies and knowledge graphs. It provides tools for parsing, analyzing, and managing ontology data, supporting researchers and data scientists in the biomedical domain.

Open SourceMIT
CLI
B
Visit PyPI↗
⭐12
stars
🍴1
fork
✓5
features
📅2022
since

Overview

5 features
  • ✓Ontology parsing
  • ✓Knowledge graph tools
  • ✓Biomedical data support
  • ✓CLI interface
  • ✓OBO Foundry compatibility

Tags

biomedical-ontologiesknowledge-graphsobo-foundrycli-tool

Built with & integrations

Runs on
CLI

Trust & compliance

LicenseMIT
Verified signals
✓ HTTPS✓ Open Source✓ Free tier✓ GitHub · ★ 12✓ Active maintenance

Recent events

Latest indexed changes and source events

  1. IndexedJul 3, 11:20 AM

    bioontologies discovered by the PulseGate indexer

    Source: PulseGate indexerOpen ↗

At a glance

Platforms
Cli
Languages
English
Open source
Yes · ★ 12
License
MIT
First seen
May 16, 2022
Activity
🟢 Active
Status
🟢 Active
Built for
Biomedical researchers and data scientists
Model
Open source
Solves
Simplifying the management and analysis of biomedical ontologies and knowledge graphs for researchers.

Developer

biopragmatics
Small team
↗ GitHub

Open source

View on GitHub →
⭐ Stars
12
🍴 Forks
1
Open issues
4
Last commit
1w ago
Commits 90d
11
Contributors
2
Authorship
Small team
Default branch
main
Latest release
v0.7.3 · 1y ago

PulseGate index

Confidence
Low · 64
Indexed
Jul 3, 2026
Lifecycle
Alive
Activity
Active
First seen
May 2022
Last seen
1w ago
Freshness
Unknown
Identity audit (9)
Entity ID
cmr4uei02000xvjbltcm4p9qp
Slug
bioontologies-pypi-org
Verification state
Indexed for public listing
Claim / listing state
Unclaimed · listed: yes
Index status
Included in index
Latest evidence snapshot
Jul 3, 2026
Timeline basis
Indexed-at chronology (no inferred launch/funding milestones).
Last updated
Jul 3, 2026
Canonical URL
https://pypi.org/project/bioontologies

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  • The BioCypher Ecosystem
    biocypher.org